HL_9PJ7_073

3D structure

PDB id

9PJ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

C. acnes 70S ribosome bound to Doxycycline

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CGAG

Length

4 nucleotides

Bulged bases

9PJ7|1|a|G|1749

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9PJ7_073 not in the Motif Atlas

Homologous match to HL_7A0S_039

Geometric discrepancy: 0.1331

The information below is about HL_7A0S_039

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.4

Basepair signature

cWW-F

Number of instances in this motif group

48

Unit IDs

9PJ7|1|a|C|1748
9PJ7|1|a|G|1749
9PJ7|1|a|A|1750
9PJ7|1|a|G|1751

Current chains

Chain a

23S rRNA

Nearby chains

Chain c

50S ribosomal protein L2