HL_9PJ8_094
3D structure
- PDB id
- 9PJ8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- C. acnes 70S ribosome bound to Sarecycline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- UGGAGUCG
- Length
- 8 nucleotides
- Bulged bases
- 9PJ8|1|a|G|2711
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9PJ8_094 not in the Motif Atlas
- Homologous match to HL_7A0S_060
- Geometric discrepancy: 0.148
- The information below is about HL_7A0S_060
- Detailed Annotation
- GNRA variation
- Broad Annotation
- GNRA variation
- Motif group
- HL_46665.3
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
9PJ8|1|a|U|2710
9PJ8|1|a|G|2711
9PJ8|1|a|G|2712
9PJ8|1|a|A|2713
9PJ8|1|a|G|2714
9PJ8|1|a|U|2715
9PJ8|1|a|C|2716
9PJ8|1|a|G|2717
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 3
- 50S ribosomal protein L36
- Chain g
- 50S ribosomal protein L6
Coloring options: