HL_9PJ9_050

3D structure

PDB id

9PJ9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

C. acnes 70S ribosome bound to Minocycline

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

CUGUGUG

Length

7 nucleotides

Bulged bases

9PJ9|1|a|U|632, 9PJ9|1|a|G|633

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9PJ9_050 not in the Motif Atlas

Geometric match to HL_9AXU_012

Geometric discrepancy: 0.2809

The information below is about HL_9AXU_012

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_79773.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

8

Unit IDs

9PJ9|1|a|C|629
9PJ9|1|a|U|630
9PJ9|1|a|G|631
9PJ9|1|a|U|632
9PJ9|1|a|G|633
9PJ9|1|a|U|634
9PJ9|1|a|G|635

Current chains

Chain a

23S rRNA

Nearby chains