HL_9PJ9_062
3D structure
- PDB id
- 9PJ9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- C. acnes 70S ribosome bound to Minocycline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- CUUGGAAGCAG
- Length
- 11 nucleotides
- Bulged bases
- 9PJ9|1|a|G|1150, 9PJ9|1|a|A|1153
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9PJ9_062 not in the Motif Atlas
- Homologous match to HL_1MMS_003
- Geometric discrepancy: 0.5811
- The information below is about HL_1MMS_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_20174.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
9PJ9|1|a|C|1147
9PJ9|1|a|U|1148
9PJ9|1|a|U|1149
9PJ9|1|a|G|1150
9PJ9|1|a|G|1151
9PJ9|1|a|A|1152
9PJ9|1|a|A|1153
9PJ9|1|a|G|1154
9PJ9|1|a|C|1155
9PJ9|1|a|A|1156
9PJ9|1|a|G|1157
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain l
- 50S ribosomal protein L16
Coloring options: