HL_9PKD_093
3D structure
- PDB id
- 9PKD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ CHX and HHT treated 80S consensus ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.42 Å
Loop
- Sequence
- GUCGCCGUGCC
- Length
- 11 nucleotides
- Bulged bases
- 9PKD|1|S2|G|385
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9PKD|1|S2|G|377
9PKD|1|S2|U|378
9PKD|1|S2|C|379
9PKD|1|S2|G|380
9PKD|1|S2|C|381
9PKD|1|S2|C|382
9PKD|1|S2|G|383
9PKD|1|S2|U|384
9PKD|1|S2|G|385
9PKD|1|S2|C|386
9PKD|1|S2|C|387
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain SI
- 40S ribosomal protein S8
- Chain SL
- 40S ribosomal protein S11
Coloring options: