HL_9PR4_022

3D structure

PDB id

9PR4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In Situ Structure of the Human Mitochondrial Large Subunit 39S in Complex with TACO1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

AGCAUCACCAGUAUU

Length

15 nucleotides

Bulged bases

9PR4|1|A|A|2521, 9PR4|1|A|U|2522, 9PR4|1|A|C|2523, 9PR4|1|A|A|2527, 9PR4|1|A|U|2531

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PR4|1|A|A|2518
9PR4|1|A|G|2519
9PR4|1|A|C|2520
9PR4|1|A|A|2521
9PR4|1|A|U|2522
9PR4|1|A|C|2523
9PR4|1|A|A|2524
9PR4|1|A|C|2525
9PR4|1|A|C|2526
9PR4|1|A|A|2527
9PR4|1|A|G|2528
9PR4|1|A|U|2529
9PR4|1|A|A|2530
9PR4|1|A|U|2531
9PR4|1|A|U|2532

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain 5

39S ribosomal protein L37, mitochondrial

Chain D

39S ribosomal protein L2, mitochondrial