3D structure

PDB id
9PR4 (explore in PDB, NAKB, or RNA 3D Hub)
Description
In Situ Structure of the Human Mitochondrial Large Subunit 39S in Complex with TACO1
Experimental method
ELECTRON MICROSCOPY
Resolution
2.77 Å

Loop

Sequence
AAUGAUAUCAUCUCAACU
Length
18 nucleotides
Bulged bases
9PR4|1|A|U|3183, 9PR4|1|A|C|3189
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9PR4|1|A|A|3176
9PR4|1|A|A|3177
9PR4|1|A|U|3178
9PR4|1|A|G|3179
9PR4|1|A|A|3180
9PR4|1|A|U|3181
9PR4|1|A|A|3182
9PR4|1|A|U|3183
9PR4|1|A|C|3184
9PR4|1|A|A|3185
9PR4|1|A|U|3186
9PR4|1|A|C|3187
9PR4|1|A|U|3188
9PR4|1|A|C|3189
9PR4|1|A|A|3190
9PR4|1|A|A|3191
9PR4|1|A|C|3192
9PR4|1|A|U|3193

Current chains

Chain A
16S mitochondrial rRNA

Nearby chains

Chain 4
39S ribosomal protein L36, mitochondrial
Chain K
Large ribosomal subunit protein uL13m
Chain k
Large ribosomal subunit protein mL53
Chain r
39S ribosomal protein S18a, mitochondrial

Coloring options:

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