HL_9PRA_024

3D structure

PDB id

9PRA (explore in PDB, NAKB, or RNA 3D Hub)

Description

In Situ Structure of the Human Mitoribosome Large Subunit 39S in Complex with EF-Tu

Experimental method

ELECTRON MICROSCOPY

Resolution

2.83 Å

Loop

Sequence

GUACCCUAAC

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9PRA_024 not in the Motif Atlas

Geometric match to HL_9DFE_046

Geometric discrepancy: 0.3963

The information below is about HL_9DFE_046

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_82185.3

Basepair signature

cWW-F-F-tHW-F-F-F-F

Number of instances in this motif group

6

Unit IDs

9PRA|1|A|G|2574
9PRA|1|A|U|2575
9PRA|1|A|A|2576
9PRA|1|A|C|2577
9PRA|1|A|C|2578
9PRA|1|A|C|2579
9PRA|1|A|U|2580
9PRA|1|A|A|2581
9PRA|1|A|A|2582
9PRA|1|A|C|2583

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains