HL_9PRA_032

3D structure

PDB id

9PRA (explore in PDB, NAKB, or RNA 3D Hub)

Description

In Situ Structure of the Human Mitoribosome Large Subunit 39S in Complex with EF-Tu

Experimental method

ELECTRON MICROSCOPY

Resolution

2.83 Å

Loop

Sequence

AGUCCAUAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9PRA_032 not in the Motif Atlas

Homologous match to HL_7A0S_059

Geometric discrepancy: 0.2061

The information below is about HL_7A0S_059

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_52011.3

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

10

Unit IDs

9PRA|1|A|A|2958
9PRA|1|A|G|2959
9PRA|1|A|U|2960
9PRA|1|A|C|2961
9PRA|1|A|C|2962
9PRA|1|A|A|2963
9PRA|1|A|U|2964
9PRA|1|A|A|2965
9PRA|1|A|U|2966

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain 4

39S ribosomal protein L36, mitochondrial