HL_9PRQ_065
3D structure
- PDB id
- 9PRQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of human mitoribosome in the A/T-P state from TACO1-knockout cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.34 Å
Loop
- Sequence
- UUAACACAAA
- Length
- 10 nucleotides
- Bulged bases
- 9PRQ|1|B|U|13, 9PRQ|1|B|C|19
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9PRQ_065 not in the Motif Atlas
- Homologous match to HL_5B63_003
- Geometric discrepancy: 0.191
- The information below is about HL_5B63_003
- Detailed Annotation
- tRNA D-loop
- Broad Annotation
- No text annotation
- Motif group
- HL_20490.1
- Basepair signature
- cWW-cWS-F
- Number of instances in this motif group
- 13
Unit IDs
9PRQ|1|B|U|12
9PRQ|1|B|U|13
9PRQ|1|B|A|14
9PRQ|1|B|A|15
9PRQ|1|B|C|16
9PRQ|1|B|A|18
9PRQ|1|B|C|19
9PRQ|1|B|A|20
9PRQ|1|B|A|21
9PRQ|1|B|A|23
Current chains
- Chain B
- mitochondrial tRNAVal
Nearby chains
- Chain 6
- 39S ribosomal protein L38, mitochondrial
- Chain P
- 39S ribosomal protein L18, mitochondrial
Coloring options: