HL_9PRX_009
3D structure
- PDB id
- 9PRX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of the human mitoribosome in the A-P state from TACO1-knockout cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.23 Å
Loop
- Sequence
- GCGACAAAC
- Length
- 9 nucleotides
- Bulged bases
- 9PRX|1|A|A|1991, 9PRX|1|A|A|1994
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9PRX_009 not in the Motif Atlas
- Geometric match to HL_9E6Q_025
- Geometric discrepancy: 0.2063
- The information below is about HL_9E6Q_025
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_92598.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
9PRX|1|A|G|1988
9PRX|1|A|C|1989
9PRX|1|A|G|1990
9PRX|1|A|A|1991
9PRX|1|A|C|1992
9PRX|1|A|A|1993
9PRX|1|A|A|1994
9PRX|1|A|A|1995
9PRX|1|A|C|1996
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 2
- 39S ribosomal protein L34, mitochondrial
- Chain D
- 39S ribosomal protein L2, mitochondrial
Coloring options: