HL_9PRX_010

3D structure

PDB id

9PRX (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of the human mitoribosome in the A-P state from TACO1-knockout cells

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

UCUUAG

Length

6 nucleotides

Bulged bases

9PRX|1|A|C|2036, 9PRX|1|A|A|2039

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9PRX_010 not in the Motif Atlas

Homologous match to HL_7A0S_024

Geometric discrepancy: 0.4911

The information below is about HL_7A0S_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_27530.1

Basepair signature

cWW-F-F

Number of instances in this motif group

10

Unit IDs

9PRX|1|A|U|2035
9PRX|1|A|C|2036
9PRX|1|A|U|2037
9PRX|1|A|U|2038
9PRX|1|A|A|2039
9PRX|1|A|G|2040

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain M

39S ribosomal protein L15, mitochondrial