HL_9PRX_061
3D structure
- PDB id
- 9PRX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of the human mitoribosome in the A-P state from TACO1-knockout cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.23 Å
Loop
- Sequence
- GAUUAACACUC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9PRX_061 not in the Motif Atlas
- Geometric match to HL_5IB8_208
- Geometric discrepancy: 0.2706
- The information below is about HL_5IB8_208
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_14063.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
9PRX|1|Aw|G|30
9PRX|1|Aw|A|31
9PRX|1|Aw|U|32
9PRX|1|Aw|U|33
9PRX|1|Aw|A|34
9PRX|1|Aw|A|35
9PRX|1|Aw|C|36
9PRX|1|Aw|A|37
9PRX|1|Aw|C|38
9PRX|1|Aw|U|39
9PRX|1|Aw|C|40
Current chains
- Chain Aw
- A/A-tRNA
Nearby chains
- Chain 8
- 39S ribosomal protein L40, mitochondrial
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain AJ
- 28S ribosomal protein S12, mitochondrial
- Chain Az
- mRNA
Coloring options: