HL_9PS0_048
3D structure
- PDB id
- 9PS0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of the human mitoribosome in the A/P-P/E state from TACO1-knockout cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.29 Å
Loop
- Sequence
- UGUAAAAA
- Length
- 8 nucleotides
- Bulged bases
- 9PS0|1|AA|U|992
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9PS0_048 not in the Motif Atlas
- Geometric match to HL_9DFE_020
- Geometric discrepancy: 0.3635
- The information below is about HL_9DFE_020
- Detailed Annotation
- GNRA wlth tandem sheared
- Broad Annotation
- No text annotation
- Motif group
- HL_98423.3
- Basepair signature
- cWW-tSH-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
9PS0|1|AA|U|990
9PS0|1|AA|G|991
9PS0|1|AA|U|992
9PS0|1|AA|A|993
9PS0|1|AA|A|994
9PS0|1|AA|A|995
9PS0|1|AA|A|996
9PS0|1|AA|A|997
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain AF
- 28S ribosomal protein S7, mitochondrial
- Chain AI
- 28S ribosomal protein S11, mitochondrial
- Chain AQ
- Small ribosomal subunit protein bS21m
- Chain Ax
- Transfer RNA; tRNA
- Chain Az
- mRNA
Coloring options: