HL_9PSM_062
3D structure
- PDB id
- 9PSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of the human mitoribosome in the A/P-P/E state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.98 Å
Loop
- Sequence
- ACUCAUAUU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9PSM_062 not in the Motif Atlas
- Homologous match to HL_5J8B_109
- Geometric discrepancy: 0.1179
- The information below is about HL_5J8B_109
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_81376.3
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 43
Unit IDs
9PSM|1|Ax|A|31
9PSM|1|Ax|C|32
9PSM|1|Ax|U|33
9PSM|1|Ax|C|34
9PSM|1|Ax|A|35
9PSM|1|Ax|U|36
9PSM|1|Ax|A|37
9PSM|1|Ax|U|38
9PSM|1|Ax|U|39
Current chains
- Chain Ax
- P/E-tRNA
Nearby chains
- Chain 8
- 39S ribosomal protein L40, mitochondrial
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain AG
- 28S ribosomal protein S9, mitochondrial
- Chain Az
- mRNA
Coloring options: