HL_9PSM_063
3D structure
- PDB id
- 9PSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of the human mitoribosome in the A/P-P/E state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.98 Å
Loop
- Sequence
- GUUCAAUUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9PSM_063 not in the Motif Atlas
- Homologous match to HL_4V9Q_215
- Geometric discrepancy: 0.3853
- The information below is about HL_4V9Q_215
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33597.3
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 135
Unit IDs
9PSM|1|Ax|G|53
9PSM|1|Ax|U|54
9PSM|1|Ax|U|55
9PSM|1|Ax|C|56
9PSM|1|Ax|A|57
9PSM|1|Ax|A|58
9PSM|1|Ax|U|59
9PSM|1|Ax|U|60
9PSM|1|Ax|C|61
Current chains
- Chain Ax
- P/E-tRNA
Nearby chains
- Chain q
- Growth arrest and DNA damage-inducible proteins-interacting protein 1
Coloring options: