HL_9PZG_012

3D structure

PDB id

9PZG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial ribosomal 2'-O-methyltransferase RsmI in complex with the small ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.42 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

9PZG|1|A|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9PZG_012 not in the Motif Atlas

Geometric match to HL_8B0X_011

Geometric discrepancy: 0.2282

The information below is about HL_8B0X_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_98423.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

12

Unit IDs

9PZG|1|A|G|462
9PZG|1|A|U|463
9PZG|1|A|U|464
9PZG|1|A|A|465
9PZG|1|A|A|466
9PZG|1|A|U|467
9PZG|1|A|A|468
9PZG|1|A|C|469
9PZG|1|A|C|470

Current chains

Chain A

16S rRNA

Nearby chains