HL_9PZG_017
3D structure
- PDB id
- 9PZG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacterial ribosomal 2'-O-methyltransferase RsmI in complex with the small ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.42 Å
Loop
- Sequence
- GAUUAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9PZG_017 not in the Motif Atlas
- Geometric match to HL_4UYK_001
- Geometric discrepancy: 0.2728
- The information below is about HL_4UYK_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_14063.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
9PZG|1|A|G|786
9PZG|1|A|A|787
9PZG|1|A|U|788
9PZG|1|A|U|789
9PZG|1|A|A|790
9PZG|1|A|G|791
9PZG|1|A|A|792
9PZG|1|A|U|793
9PZG|1|A|A|794
9PZG|1|A|C|795
9PZG|1|A|C|796
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain K
- Small ribosomal subunit protein uS11
- Chain V
- Ribosomal RNA small subunit methyltransferase I
- Chain W
- Ribosomal RNA small subunit methyltransferase I
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