HL_9PZG_032

3D structure

PDB id

9PZG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial ribosomal 2'-O-methyltransferase RsmI in complex with the small ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.42 Å

Loop

Sequence

GGG(MA6)(MA6)C

Length

6 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: MA6

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9PZG_032 not in the Motif Atlas

Geometric match to HL_9DFE_063

Geometric discrepancy: 0.3929

The information below is about HL_9DFE_063

Detailed Annotation

Other HL

Broad Annotation

Other HL

Motif group

HL_64036.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

27

Unit IDs

9PZG|1|A|G|1515
9PZG|1|A|G|1516
9PZG|1|A|G|1517
9PZG|1|A|MA6|1518
9PZG|1|A|MA6|1519
9PZG|1|A|C|1520

Current chains

Chain A

16S rRNA

Nearby chains

Chain W

Ribosomal RNA small subunit methyltransferase I