HL_9Q2M_047

3D structure

PDB id

9Q2M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit ribosomal 80S elongation complex with eEF2, partial P site Ala-tRNA, E site Ala-tRNA on NediV ORF

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UUUAAUUAAAA

Length

11 nucleotides

Bulged bases

9Q2M|1|5|A|3642, 9Q2M|1|5|A|3643, 9Q2M|1|5|U|3644, 9Q2M|1|5|A|3648

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Q2M|1|5|U|3639
9Q2M|1|5|U|3640
9Q2M|1|5|U|3641
9Q2M|1|5|A|3642
9Q2M|1|5|A|3643
9Q2M|1|5|U|3644
9Q2M|1|5|U|3645
9Q2M|1|5|A|3646
9Q2M|1|5|A|3647
9Q2M|1|5|A|3648
9Q2M|1|5|A|3649

Current chains

Chain 5

28S rRNA

Nearby chains

Chain A

60S ribosomal protein L8

Chain j

60S ribosomal protein L37