HL_9Q2M_050

3D structure

PDB id

9Q2M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit ribosomal 80S elongation complex with eEF2, partial P site Ala-tRNA, E site Ala-tRNA on NediV ORF

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GUAACUAUGAC

Length

11 nucleotides

Bulged bases

9Q2M|1|5|A|3760

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Q2M|1|5|G|3757
9Q2M|1|5|U|3758
9Q2M|1|5|A|3759
9Q2M|1|5|A|3760
9Q2M|1|5|C|3761
9Q2M|1|5|U|3762
9Q2M|1|5|A|3763
9Q2M|1|5|U|3764
9Q2M|1|5|G|3765
9Q2M|1|5|A|3766
9Q2M|1|5|C|3767

Current chains

Chain 5

28S rRNA

Nearby chains

Chain 9

Small subunit ribosomal RNA; SSU rRNA

Chain EF

Elongation factor 2