HL_9Q2M_085

3D structure

PDB id

9Q2M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit ribosomal 80S elongation complex with eEF2, partial P site Ala-tRNA, E site Ala-tRNA on NediV ORF

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CCUGAGAAACGG

Length

12 nucleotides

Bulged bases

9Q2M|1|9|C|374, 9Q2M|1|9|G|375

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Q2M|1|9|C|365
9Q2M|1|9|C|366
9Q2M|1|9|U|367
9Q2M|1|9|G|368
9Q2M|1|9|A|369
9Q2M|1|9|G|370
9Q2M|1|9|A|371
9Q2M|1|9|A|372
9Q2M|1|9|A|373
9Q2M|1|9|C|374
9Q2M|1|9|G|375
9Q2M|1|9|G|376

Current chains

Chain 9

18S rRNA

Nearby chains

Chain EE

40S ribosomal protein S4

Chain GG

40S ribosomal protein S6

Chain II

40S ribosomal protein S8