HL_9Q2M_092

3D structure

PDB id

9Q2M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit ribosomal 80S elongation complex with eEF2, partial P site Ala-tRNA, E site Ala-tRNA on NediV ORF

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UGUUCAAAG

Length

9 nucleotides

Bulged bases

9Q2M|1|9|G|674, 9Q2M|1|9|U|676

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Q2M|1|9|U|673
9Q2M|1|9|G|674
9Q2M|1|9|U|675
9Q2M|1|9|U|676
9Q2M|1|9|C|677
9Q2M|1|9|A|678
9Q2M|1|9|A|679
9Q2M|1|9|A|680
9Q2M|1|9|G|681

Current chains

Chain 9

18S rRNA

Nearby chains

Chain EE

40S ribosomal protein S4

Chain JJ

40S ribosomal protein S9

Chain YY

40S ribosomal protein S24