HL_9Q2P_031
3D structure
- PDB id
- 9Q2P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit ribosomal 80S elongation complex with eEF1A, A*/T Ala-tRNA, P site Ala-tRNA, E site Ala-tRNA on NediV ORF
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CUGGCGUG
- Length
- 8 nucleotides
- Bulged bases
- 9Q2P|1|5|G|1821
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9Q2P_031 not in the Motif Atlas
- Homologous match to HL_8GLP_027
- Geometric discrepancy: 0.2597
- The information below is about HL_8GLP_027
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_63894.4
- Basepair signature
- cWW-cWW-F-F-F
- Number of instances in this motif group
- 22
Unit IDs
9Q2P|1|5|C|1816
9Q2P|1|5|U|1817
9Q2P|1|5|G|1818
9Q2P|1|5|G|1819
9Q2P|1|5|C|1820
9Q2P|1|5|G|1821
9Q2P|1|5|U|1822
9Q2P|1|5|G|1823
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain D
- 60S ribosomal protein L5
- Chain T
- 60S ribosomal protein L21
- Chain b
- eL29
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