HL_9Q2P_067

3D structure

PDB id

9Q2P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit ribosomal 80S elongation complex with eEF1A, A*/T Ala-tRNA, P site Ala-tRNA, E site Ala-tRNA on NediV ORF

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UUUGGGUUUUA

Length

11 nucleotides

Bulged bases

9Q2P|1|5|U|4354

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Q2P|1|5|U|4352
9Q2P|1|5|U|4353
9Q2P|1|5|U|4354
9Q2P|1|5|G|4355
9Q2P|1|5|G|4356
9Q2P|1|5|G|4357
9Q2P|1|5|U|4358
9Q2P|1|5|U|4359
9Q2P|1|5|U|4360
9Q2P|1|5|U|4361
9Q2P|1|5|A|4362

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain L

Large ribosomal subunit protein eL13

Chain a

60S ribosomal protein L27a

Chain i

60S ribosomal protein L36

Chain o

eL42