HL_9Q2P_093

3D structure

PDB id

9Q2P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit ribosomal 80S elongation complex with eEF1A, A*/T Ala-tRNA, P site Ala-tRNA, E site Ala-tRNA on NediV ORF

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCUGAGAAACGG

Length

12 nucleotides

Bulged bases

9Q2P|1|9|C|450, 9Q2P|1|9|G|451

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Q2P|1|9|C|441
9Q2P|1|9|C|442
9Q2P|1|9|U|443
9Q2P|1|9|G|444
9Q2P|1|9|A|445
9Q2P|1|9|G|446
9Q2P|1|9|A|447
9Q2P|1|9|A|448
9Q2P|1|9|A|449
9Q2P|1|9|C|450
9Q2P|1|9|G|451
9Q2P|1|9|G|452

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain EE

40S ribosomal protein S4

Chain GG

40S ribosomal protein S6

Chain II

40S ribosomal protein S8