HL_9Q2T_072
3D structure
- PDB id
- 9Q2T (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- NediV IRES in complex with Rabbit 80S ribosome with eEF2 and P site Ala-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- CUGAACGCCUCUAAG
- Length
- 15 nucleotides
- Bulged bases
- 9Q2T|1|5|G|4694, 9Q2T|1|5|C|4698
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9Q2T|1|5|C|4688
9Q2T|1|5|U|4689
9Q2T|1|5|G|4690
9Q2T|1|5|A|4691
9Q2T|1|5|A|4692
9Q2T|1|5|C|4693
9Q2T|1|5|G|4694
9Q2T|1|5|C|4695
9Q2T|1|5|C|4696
9Q2T|1|5|U|4697
9Q2T|1|5|C|4698
9Q2T|1|5|U|4699
9Q2T|1|5|A|4700
9Q2T|1|5|A|4701
9Q2T|1|5|G|4702
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain H
- 60S ribosomal protein L9
- Chain O
- Large ribosomal subunit protein uL13
- Chain m
- Large ribosomal subunit protein eL40
Coloring options: