HL_9Q3Q_048
3D structure
- PDB id
- 9Q3Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of translating Escherichia coli 70S ribosome bound to mRNA, P-site QKF-peptidyl-tRNAPhe, glycyl-tRNAGly in A/T conformation, EF-Tu-GDP, and bottromycin at 2.01A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.01 Å
Loop
- Sequence
- GGUAAGUUC
- Length
- 9 nucleotides
- Bulged bases
- 9Q3Q|1|A|U|1955
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9Q3Q_048 not in the Motif Atlas
- Homologous match to HL_8B0X_077
- Geometric discrepancy: 0.038
- The information below is about HL_8B0X_077
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_33350.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
9Q3Q|1|A|G|1949
9Q3Q|1|A|G|1950
9Q3Q|1|A|U|1951
9Q3Q|1|A|A|1952
9Q3Q|1|A|A|1953
9Q3Q|1|A|G|1954
9Q3Q|1|A|U|1955
9Q3Q|1|A|U|1956
9Q3Q|1|A|C|1957
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain M
- Large ribosomal subunit protein uL14
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: