HL_9Q3Q_053
3D structure
- PDB id
- 9Q3Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of translating Escherichia coli 70S ribosome bound to mRNA, P-site QKF-peptidyl-tRNAPhe, glycyl-tRNAGly in A/T conformation, EF-Tu-GDP, and bottromycin at 2.01A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.01 Å
Loop
- Sequence
- CUAAAGAGUAACG
- Length
- 13 nucleotides
- Bulged bases
- 9Q3Q|1|A|A|2268, 9Q3Q|1|A|C|2275
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9Q3Q_053 not in the Motif Atlas
- Homologous match to HL_8B0X_081
- Geometric discrepancy: 0.0394
- The information below is about HL_8B0X_081
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_02042.3
- Basepair signature
- cWW-tSH-tHH-tWW-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
9Q3Q|1|A|C|2264
9Q3Q|1|A|U|2265
9Q3Q|1|A|A|2266
9Q3Q|1|A|A|2267
9Q3Q|1|A|A|2268
9Q3Q|1|A|G|2269
9Q3Q|1|A|A|2270
9Q3Q|1|A|G|2271
9Q3Q|1|A|U|2272
9Q3Q|1|A|A|2273
9Q3Q|1|A|A|2274
9Q3Q|1|A|C|2275
9Q3Q|1|A|G|2276
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain O
- Large ribosomal subunit protein uL16
- Chain Y
- 50S ribosomal protein L27
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