HL_9Q3R_028

3D structure

PDB id

9Q3R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Escherichia coli 70S ribosome bound to mRNA, P-site fMet-tRNAfMet, glycyl-tRNAGly in A/T conformation, EF-Tu-GDPCP, and bottromycin at 1.99A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

1.99 Å

Loop

Sequence

UUAGAAGCAG

Length

10 nucleotides

Bulged bases

9Q3R|1|A|A|1070

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Q3R|1|A|U|1065
9Q3R|1|A|U|1066
9Q3R|1|A|A|1067
9Q3R|1|A|G|1068
9Q3R|1|A|A|1069
9Q3R|1|A|A|1070
9Q3R|1|A|G|1071
9Q3R|1|A|C|1072
9Q3R|1|A|A|1073
9Q3R|1|A|G|1074

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain J

50S ribosomal protein L11

Chain O

Large ribosomal subunit protein uL16

Chain w

Transfer RNA; tRNA