HL_9Q3R_077

3D structure

PDB id

9Q3R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Escherichia coli 70S ribosome bound to mRNA, P-site fMet-tRNAfMet, glycyl-tRNAGly in A/T conformation, EF-Tu-GDPCP, and bottromycin at 1.99A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

1.99 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

9Q3R|1|a|U|209, 9Q3R|1|a|C|210

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9Q3R_077 not in the Motif Atlas

Geometric match to HL_8CRE_195

Geometric discrepancy: 0.3878

The information below is about HL_8CRE_195

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50006.6

Basepair signature

cWW-F-F

Number of instances in this motif group

4

Unit IDs

9Q3R|1|a|C|207
9Q3R|1|a|U|208
9Q3R|1|a|U|209
9Q3R|1|a|C|210
9Q3R|1|a|G|211
9Q3R|1|a|G|212

Current chains

Chain a

16S Ribosomal RNA

Nearby chains