HL_9Q6S_047
3D structure
- PDB id
- 9Q6S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with pleuromutilin-30 triazole derivative and protein Y at 2.90A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GGUAAGUUC
- Length
- 9 nucleotides
- Bulged bases
- 9Q6S|1|1A|U|1955
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9Q6S_047 not in the Motif Atlas
- Homologous match to HL_8B0X_077
- Geometric discrepancy: 0.0777
- The information below is about HL_8B0X_077
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_33350.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
9Q6S|1|1A|G|1949
9Q6S|1|1A|G|1950
9Q6S|1|1A|U|1951
9Q6S|1|1A|A|1952
9Q6S|1|1A|A|1953
9Q6S|1|1A|G|1954
9Q6S|1|1A|U|1955
9Q6S|1|1A|U|1956
9Q6S|1|1A|C|1957
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 1O
- 50S ribosomal protein L14
- Chain 1a
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: