HL_9Q7Q_002
3D structure
- PDB id
- 9Q7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ABCE1-eRF1-RNC-AMD1C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- ACUAUGGAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9Q7Q_002 not in the Motif Atlas
- Homologous match to HL_4V9Q_214
- Geometric discrepancy: 0.1518
- The information below is about HL_4V9Q_214
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_81376.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 44
Unit IDs
9Q7Q|1|2|A|31
9Q7Q|1|2|C|32
9Q7Q|1|2|U|33
9Q7Q|1|2|A|34
9Q7Q|1|2|U|35
9Q7Q|1|2|G|36
9Q7Q|1|2|G|37
9Q7Q|1|2|A|38
9Q7Q|1|2|U|39
Current chains
- Chain 2
- tRNA
Nearby chains
- Chain 4
- mRNA
- Chain K
- Small subunit ribosomal RNA; SSU rRNA
- Chain RF
- Eukaryotic peptide chain release factor subunit 1
- Chain UU
- uS9
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