HL_9Q7Q_019
3D structure
- PDB id
- 9Q7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ABCE1-eRF1-RNC-AMD1C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- ACGUGCAAAU
- Length
- 10 nucleotides
- Bulged bases
- 9Q7Q|1|5|U|1596, 9Q7Q|1|5|A|1600, 9Q7Q|1|5|A|1601
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9Q7Q_019 not in the Motif Atlas
- Homologous match to HL_9AXU_018
- Geometric discrepancy: 0.1119
- The information below is about HL_9AXU_018
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50204.4
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 13
Unit IDs
9Q7Q|1|5|A|1593
9Q7Q|1|5|C|1594
9Q7Q|1|5|G|1595
9Q7Q|1|5|U|1596
9Q7Q|1|5|G|1597
9Q7Q|1|5|C|1598
9Q7Q|1|5|A|1599
9Q7Q|1|5|A|1600
9Q7Q|1|5|A|1601
9Q7Q|1|5|U|1602
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain 1
- AMD1 C-tail
- Chain B
- Ribosomal protein L3
- Chain P
- Large ribosomal subunit protein uL22
- Chain j
- Ribosomal protein L37
Coloring options: