HL_9Q7Q_097
3D structure
- PDB id
- 9Q7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ABCE1-eRF1-RNC-AMD1C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- AUUGCAAUUAUU
- Length
- 12 nucleotides
- Bulged bases
- 9Q7Q|1|K|U|1621, 9Q7Q|1|K|U|1622, 9Q7Q|1|K|A|1623
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9Q7Q_097 not in the Motif Atlas
- Homologous match to HL_9PN5_108
- Geometric discrepancy: 0.2273
- The information below is about HL_9PN5_108
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50951.4
- Basepair signature
- cWW-F-F-tWH-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
9Q7Q|1|K|A|1614
9Q7Q|1|K|U|1615
9Q7Q|1|K|U|1616
9Q7Q|1|K|G|1617
9Q7Q|1|K|C|1618
9Q7Q|1|K|A|1619
9Q7Q|1|K|A|1620
9Q7Q|1|K|U|1621
9Q7Q|1|K|U|1622
9Q7Q|1|K|A|1623
9Q7Q|1|K|U|1624
9Q7Q|1|K|U|1625
Current chains
- Chain K
- 18S rRNA
Nearby chains
- Chain 9
- eS29
- Chain II
- uS13
- Chain PP
- eS19
- Chain WW
- uS19
Coloring options: