HL_9QEG_013

3D structure

PDB id

9QEG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

CAAAG

Length

5 nucleotides

Bulged bases

9QEG|1|A|A|364, 9QEG|1|A|A|365

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9QEG_013 not in the Motif Atlas

Geometric match to HL_8CRE_006

Geometric discrepancy: 0.0618

The information below is about HL_8CRE_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

9QEG|1|A|C|362
9QEG|1|A|A|363
9QEG|1|A|A|364
9QEG|1|A|A|365
9QEG|1|A|G|366

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain E

Large ribosomal subunit protein uL4

Chain S

Large ribosomal subunit protein uL24