HL_9QEG_024
3D structure
- PDB id
- 9QEG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.21 Å
Loop
- Sequence
- GGUAACAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9QEG_024 not in the Motif Atlas
- Homologous match to HL_5J7L_154
- Geometric discrepancy: 0.1586
- The information below is about HL_5J7L_154
- Detailed Annotation
- GNRA with tandem sheared
- Broad Annotation
- No text annotation
- Motif group
- HL_81538.2
- Basepair signature
- cWW-tSH-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
9QEG|1|A|G|757
9QEG|1|A|G|758
9QEG|1|A|U|759
9QEG|1|A|A|760
9QEG|1|A|A|761
9QEG|1|A|C|762
9QEG|1|A|A|763
9QEG|1|A|C|764
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain Aa
- Small subunit ribosomal RNA; SSU rRNA
- Chain Ao
- Small ribosomal subunit protein uS15
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