HL_9QEG_034

3D structure

PDB id

9QEG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

GUUGAUAUUC

Length

10 nucleotides

Bulged bases

9QEG|1|A|U|1433, 9QEG|1|A|U|1434

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9QEG_034 not in the Motif Atlas

Homologous match to HL_5J7L_168

Geometric discrepancy: 0.1244

The information below is about HL_5J7L_168

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81545.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

7

Unit IDs

9QEG|1|A|G|1426
9QEG|1|A|U|1427
9QEG|1|A|U|1428
9QEG|1|A|G|1429
9QEG|1|A|A|1430
9QEG|1|A|U|1431
9QEG|1|A|A|1432
9QEG|1|A|U|1433
9QEG|1|A|U|1434
9QEG|1|A|C|1435

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain R

Large ribosomal subunit protein uL23