HL_9QEG_037

3D structure

PDB id

9QEG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

AUGAGAAUU

Length

9 nucleotides

Bulged bases

9QEG|1|A|A|1678

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9QEG_037 not in the Motif Atlas

Homologous match to HL_4WF9_039

Geometric discrepancy: 0.0953

The information below is about HL_4WF9_039

Detailed Annotation

GNRA with extra cWW

Broad Annotation

GNRA with extra cWW

Motif group

HL_45359.1

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

10

Unit IDs

9QEG|1|A|A|1673
9QEG|1|A|U|1674
9QEG|1|A|G|1675
9QEG|1|A|A|1676
9QEG|1|A|G|1677
9QEG|1|A|A|1678
9QEG|1|A|A|1679
9QEG|1|A|U|1680
9QEG|1|A|U|1681

Current chains

Chain A

23S ribosomal RNA

Nearby chains