HL_9QEG_050

3D structure

PDB id

9QEG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

CGCAUGGAAG

Length

10 nucleotides

Bulged bases

9QEG|1|A|C|2433

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9QEG_050 not in the Motif Atlas

Homologous match to HL_4WF9_055

Geometric discrepancy: 0.1092

The information below is about HL_4WF9_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_51853.1

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

5

Unit IDs

9QEG|1|A|C|2431
9QEG|1|A|G|2432
9QEG|1|A|C|2433
9QEG|1|A|A|2434
9QEG|1|A|U|2435
9QEG|1|A|G|2436
9QEG|1|A|G|2437
9QEG|1|A|A|2438
9QEG|1|A|A|2439
9QEG|1|A|G|2440

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain J

Large ribosomal subunit protein uL15