HL_9QEG_076

3D structure

PDB id

9QEG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

CUAACG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9QEG_076 not in the Motif Atlas

Homologous match to HL_4LFB_019

Geometric discrepancy: 0.0388

The information below is about HL_4LFB_019

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

9QEG|1|Aa|C|871
9QEG|1|Aa|U|872
9QEG|1|Aa|A|873
9QEG|1|Aa|A|874
9QEG|1|Aa|C|875
9QEG|1|Aa|G|876

Current chains

Chain Aa

16S ribosomal RNA

Nearby chains

Chain Ae

Small ribosomal subunit protein uS5

Chain Ah

Small ribosomal subunit protein uS8