HL_9QEH_040

3D structure

PDB id

9QEH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the A2085-methylated 50S ribosome of a MLSb resistant S. aureus strain "MNY196" in complex with solithromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.08 Å

Loop

Sequence

GGUAAGUUC

Length

9 nucleotides

Bulged bases

9QEH|1|A|U|1982

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9QEH_040 not in the Motif Atlas

Homologous match to HL_5J7L_182

Geometric discrepancy: 0.0609

The information below is about HL_5J7L_182

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_20167.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

10

Unit IDs

9QEH|1|A|G|1976
9QEH|1|A|G|1977
9QEH|1|A|U|1978
9QEH|1|A|A|1979
9QEH|1|A|A|1980
9QEH|1|A|G|1981
9QEH|1|A|U|1982
9QEH|1|A|U|1983
9QEH|1|A|C|1984

Current chains

Chain A

23S rRNA

Nearby chains

Chain I

Large ribosomal subunit protein uL14