HL_9QEH_058
3D structure
- PDB id
- 9QEH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the A2085-methylated 50S ribosome of a MLSb resistant S. aureus strain "MNY196" in complex with solithromycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.08 Å
Loop
- Sequence
- UUCCCAUGCCGAACA
- Length
- 15 nucleotides
- Bulged bases
- 9QEH|1|B|G|39
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9QEH_058 not in the Motif Atlas
- Geometric match to HL_4V9F_074
- Geometric discrepancy: 0.1112
- The information below is about HL_4V9F_074
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97756.4
- Basepair signature
- cWW-cSH-cWS-F-tSW-cSW-F-cWW-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
9QEH|1|B|U|32
9QEH|1|B|U|33
9QEH|1|B|C|34
9QEH|1|B|C|35
9QEH|1|B|C|36
9QEH|1|B|A|37
9QEH|1|B|U|38
9QEH|1|B|G|39
9QEH|1|B|C|40
9QEH|1|B|C|41
9QEH|1|B|G|42
9QEH|1|B|A|43
9QEH|1|B|A|44
9QEH|1|B|C|45
9QEH|1|B|A|46
Current chains
- Chain B
- 5S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain F
- Large ribosomal subunit protein uL5
- Chain M
- Large ribosomal subunit protein uL18
Coloring options: