HL_9QIW_029
3D structure
- PDB id
- 9QIW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human pre-60S - State 3
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.04 Å
Loop
- Sequence
- CGCAGCAG
- Length
- 8 nucleotides
- Bulged bases
- 9QIW|1|L5|C|2794, 9QIW|1|L5|G|2796
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9QIW_029 not in the Motif Atlas
- Geometric match to HL_6CB3_006
- Geometric discrepancy: 0.3733
- The information below is about HL_6CB3_006
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 335
Unit IDs
9QIW|1|L5|C|2792
9QIW|1|L5|G|2793
9QIW|1|L5|C|2794
9QIW|1|L5|A|2795
9QIW|1|L5|G|2796
9QIW|1|L5|C|2797
9QIW|1|L5|A|2798
9QIW|1|L5|G|2799
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LP
- 60S ribosomal protein L17
- Chain Lj
- Large ribosomal subunit protein eL37
- Chain Ll
- 60S ribosomal protein L39
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