RNA 3D Hub //

9QIW Hairpin, Internal, and multi-helix Junction Loop Motifs

Download loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_9QIW_0011/L5/68:73No text annotation
homologous
HL_8CRE_002
NA
HL_9QIW_0021/L5/89:95No text annotation
homologous
HL_8CRE_003
NA
HL_9QIW_0031/L5/132:136No text annotation
HL_9QIW_0041/L5/204:211T-loop with 1 bulged base
homologous
HL_8P9A_117
HL_13999.1
HL_9QIW_0051/L5/222:226No text annotation
geometric
HL_5J7L_143
NA
HL_9QIW_0061/L5/230:238T-loop with unstacked turn
homologous
HL_8CRE_007
NA
HL_9QIW_0071/L5/289:298T-loop related
homologous
HL_8CRE_008
NA
HL_9QIW_0081/L5/314:323No text annotation
homologous
HL_8CRE_009
NA
HL_9QIW_0091/L5/368:373GNRA
homologous
HL_8P9A_122
HL_34789.1
HL_9QIW_0101/L5/393:398GNRA
homologous
HL_8CRE_011
NA
HL_9QIW_0111/L5/1389:1394GNRA
homologous
HL_8P9A_128
HL_34789.1
HL_9QIW_0141/L5/1864:1870Other HL
geometric
HL_4V9F_039
HL_67772.1
HL_9QIW_0151/L5/1886:1893No text annotation
homologous
HL_8P9A_138
HL_47171.1
HL_9QIW_0161/L5/1978:1988No text annotation
homologous
HL_8CRE_026
NA
HL_9QIW_0171/L5/2006:2013GNRA wlth tandem sheared
homologous
HL_8P9A_140
HL_98423.1
HL_9QIW_0181/L5/2317:2322GNRA
homologous
HL_8CRE_029
NA
HL_9QIW_0191/L5/2376:2384T-loop with 2 stacked bulged bases
homologous
HL_8CRE_030
NA
HL_9QIW_0201/L5/2420:2426Pseudoknot geometry with 3' bulge
homologous
HL_8P9A_144
HL_49081.1
HL_9QIW_0211/L5/2458:2463GNRA variation
homologous
HL_8CRE_032
NA
HL_9QIW_0231/L5/2523:2532No text annotation
homologous
HL_8P9A_146
HL_77449.1
HL_9QIW_0251/L5/2578:2583GNRA
homologous
HL_8CRE_035
NA
HL_9QIW_0261/L5/2624:2632Pseudoknot geometry
homologous
HL_8CRE_036
NA
HL_9QIW_0271/L5/2664:2670No text annotation
homologous
HL_8P9A_149
HL_97067.1
HL_9QIW_0281/L5/2738:2742No text annotation
homologous
HL_8CRE_039
NA
HL_9QIW_0291/L5/2792:2799GNRA
geometric
HL_6CB3_006
HL_34789.1
HL_9QIW_0301/L5/2810:2816GNRA
homologous
HL_8CRE_041
NA
HL_9QIW_0321/L5/3873:3882No text annotation
HL_9QIW_0341/L5/4250:4258No text annotation
homologous
HL_8CRE_055
NA
HL_9QIW_0351/L5/4270:4277No text annotation
HL_9QIW_0361/L5/4303:4309No text annotation
geometric
HL_2ZUE_002
HL_56131.2
HL_9QIW_0371/L5/4321:4326GNRA
homologous
HL_8P9A_170
HL_34789.1
HL_9QIW_0381/L5/4352:4362No text annotation
geometric
HL_7JRT_001
NA
HL_9QIW_0391/L5/4474:4481GNRA variation
homologous
HL_8P9A_173
HL_46665.1
HL_9QIW_0401/L5/4497:4503No text annotation
HL_9QIW_0411/L5/4540:4545GNRA
homologous
HL_8CRE_063
NA
HL_9QIW_0421/L5/4603:4608GNRA
homologous
HL_8CRE_064
NA
HL_9QIW_0431/L5/4646:4651No text annotation
homologous
HL_8CRE_065
NA
HL_9QIW_0441/L5/4688:4702No text annotation
homologous
HL_8CRE_066
NA
HL_9QIW_0451/L5/4907:4914No text annotation
geometric
HL_8P9A_180
HL_31089.1
HL_9QIW_0461/L5/4975:4983No text annotation
homologous
HL_8CRE_069
NA
HL_9QIW_0471/L7/32:45No text annotation
geometric
HL_8OI5_068
HL_01182.1
HL_9QIW_0481/L7/36:41No text annotation
homologous
HL_8OI5_069
HL_59381.1
HL_9QIW_0501/L8/47:56No text annotation
homologous
HL_8CRE_074
NA
HL_9QIW_0511/L8/107:112No text annotation
homologous
HL_8P9A_188
HL_13184.1

Problematic loops

#loop idProblemSequence
HL_9QIW_012No text annotation
HL_9QIW_013GNRA
HL_9QIW_022No text annotation
HL_9QIW_024GNRA
HL_9QIW_031GNRA
HL_9QIW_033No text annotation
HL_9QIW_049GNRA

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_9QIW_0011/L5/6:7,
1/L8/149:151		Single bulged C
geometric
IL_1DQF_001
NA
IL_9QIW_0021/L5/12:14,
1/L8/143:144		Single bulged U
homologous
IL_8P9A_232
IL_97561.1
IL_9QIW_0031/L5/16:18,
1/L8/139:141		Isolated non-canonical cWW pair
geometric
IL_1Z7F_006
NA
IL_9QIW_0041/L5/26:27,
1/L5/55:57		Single stack bend
homologous
IL_8CRE_004
NA
IL_9QIW_0051/L5/30:37,
1/L5/44:52		tSH-tHW-tHH-tHS
homologous
IL_8CRE_005
NA
IL_9QIW_0061/L5/81:88,
1/L5/96:102		8x7 Sarcin-Ricin; G-bulge
geometric
IL_1JBR_001
NA
IL_9QIW_0071/L5/118:121,
1/L5/152:153		Stack outside cWW
geometric
IL_5J7L_268
NA
IL_9QIW_0081/L5/118:122,
1/L5/147:153		No text annotation
IL_9QIW_0091/L5/121:122,
1/L5/147:152		No text annotation
homologous
IL_8CRE_007
NA
IL_9QIW_0101/L5/125:126,
1/L5/142:144		Single bulged C
geometric
IL_1DQF_001
NA
IL_9QIW_0121/L5/195:196,
1/L5/244:246		Single bulged C
geometric
IL_1DQF_001
NA
IL_9QIW_0131/L5/199:201,
1/L5/214:215		No text annotation
homologous
IL_8CRE_013
NA
IL_9QIW_0141/L5/339:342,
1/L8/32:33		Minor groove platform
geometric
IL_9DFE_073
IL_24264.1
IL_9QIW_0151/L5/348:350,
1/L8/25:26		Single bulged A
homologous
IL_8CRE_014
NA
IL_9QIW_0161/L5/387:390,
1/L5/401:414		No text annotation
geometric
IL_8P9A_243
IL_44923.1
IL_9QIW_0171/L5/415:421,
1/L8/13:19		No text annotation
homologous
IL_8P9A_244
IL_22311.1
IL_9QIW_0181/L5/443:446,
1/L5/1300:1304		No text annotation
IL_9QIW_0191/L5/448:450,
1/L5/1297:1298		Single bulged C
geometric
IL_4C7O_003
NA
IL_9QIW_0201/L5/459:460,
1/L5/695:697		Single bulged C
geometric
IL_7PMM_001
IL_05642.1
IL_9QIW_0221/L5/466:472,
1/L5/682:689		No text annotation
IL_9QIW_0241/L5/487:488,
1/L5/665:669		No text annotation
IL_9QIW_0271/L5/508:510,
1/L5/649:650		Single bulged A
geometric
IL_6WPI_001
IL_14190.1
IL_9QIW_0291/L5/709:710,
1/L5/1286:1288		Single bulged G
geometric
IL_4LFB_036
IL_28408.1
IL_9QIW_0301/L5/723:724,
1/L5/942:945		Multiple bulged bases
geometric
IL_7Q80_003
IL_44609.1
IL_9QIW_0311/L5/727:731,
1/L5/938:939		No text annotation
IL_9QIW_0321/L5/732:735,
1/L5/928:937		No text annotation
IL_9QIW_0331/L5/737:739,
1/L5/924:926		No text annotation
IL_9QIW_0351/L5/745:752,
1/L5/911:919		No text annotation
geometric
IL_8CRE_022
NA
IL_9QIW_0361/L5/1073:1074,
1/L5/1237:1239		Single bulged A
geometric
IL_2VPL_002
IL_14190.1
IL_9QIW_0381/L5/1357:1360,
1/L5/1379:1382		No text annotation
IL_9QIW_0391/L5/1357:1361,
1/L5/1376:1382		No text annotation
IL_9QIW_0401/L5/1360:1361,
1/L5/1376:1379		Single bulged A
geometric
IL_4V9F_090
IL_73464.1
IL_9QIW_0411/L5/1425:1429,
1/L5/1455:1460		Triple sheared related
geometric
IL_4V9F_018
IL_67427.1
IL_9QIW_0421/L5/1431:1434,
1/L5/1450:1453		Double sheared
geometric
IL_4LFB_060
IL_58355.1
IL_9QIW_0431/L5/1467:1468,
1/L5/1496:1498		Single bulged A
geometric
IL_6D3P_004
NA
IL_9QIW_0451/L5/1520:1522,
1/L5/1655:1657		Isolated non-canonical cWW pair
homologous
IL_8P9A_255
IL_01003.1
IL_9QIW_0461/L5/1522:1526,
1/L5/1648:1655		No text annotation
homologous
IL_8P9A_256
IL_73855.1
IL_9QIW_0471/L5/1545:1546,
1/L5/1612:1614		Single bulged A
homologous
IL_8CRE_031
NA
IL_9QIW_0511/L5/1686:1688,
1/L5/1848:1851		No text annotation
IL_9QIW_0521/L5/1723:1725,
1/L5/1838:1839		No text annotation
homologous
IL_8CRE_040
NA
IL_9QIW_0531/L5/1732:1738,
1/L5/1790:1797		No text annotation
IL_9QIW_0561/L5/1858:1860,
1/L5/1874:1876		Isolated non-canonical cWW pair
homologous
IL_8CRE_049
NA
IL_9QIW_0571/L5/1905:1909,
1/L5/2067:2071		UAA/GAN
homologous
IL_8CRE_051
NA
IL_9QIW_0581/L5/1911:1918,
1/L5/2064:2065		SSU/LSU pseudoknot
homologous
IL_8CRE_052
NA
IL_9QIW_0591/L5/1918:1920,
1/L5/2063:2064		Single bulged G
geometric
IL_8TSV_002
NA
IL_9QIW_0601/L5/1920:1922,
1/L5/2062:2063		No text annotation
IL_9QIW_0611/L5/1926:1933,
1/L5/2053:2058		No text annotation
homologous
IL_8CRE_054
NA
IL_9QIW_0621/L5/1946:1948,
1/L5/2035:2036		Single bulged U
homologous
IL_8P9A_281
IL_97561.1
IL_9QIW_0631/L5/1957:1965,
1/L5/2022:2026		Kink-turn
homologous
IL_8CRE_057
NA
IL_9QIW_0641/L5/1973:1977,
1/L5/1989:1993		No text annotation
homologous
IL_8P9A_283
IL_16218.3
IL_9QIW_0651/L5/2001:2005,
1/L5/2014:2016		No text annotation
homologous
IL_8P9A_284
IL_36931.1
IL_9QIW_0661/L5/2083:2085,
1/L5/2272:2273		Single bulged C
geometric
IL_3D0U_001
IL_05642.1
IL_9QIW_0671/L5/2290:2292,
1/L5/2342:2345		No text annotation
homologous
IL_8P9A_285
IL_42997.4
IL_9QIW_0681/L5/2299:2301,
1/L5/2334:2335		Single bulged A
homologous
IL_8CRE_062
NA
IL_9QIW_0691/L5/2302:2309,
1/L5/2329:2333		Kink-turn
homologous
IL_8P9A_287
IL_90775.1
IL_9QIW_0701/L5/2312:2314,
1/L5/2325:2326		Single bulged A
geometric
IL_7DLZ_001
NA
IL_9QIW_0711/L5/2358:2364,
1/L5/3858:3863		7x6 Sarcin-Ricin; G-bulge
homologous
IL_8CRE_065
NA
IL_9QIW_0721/L5/2415:2419,
1/L5/2427:2429		Minor groove platform
geometric
IL_5J7L_041
NA
IL_9QIW_0731/L5/2446:2450,
1/L5/2509:2514		UAA/GAN
homologous
IL_8CRE_067
NA
IL_9QIW_0741/L5/2477:2479,
1/L5/2499:2500		No text annotation
IL_9QIW_0761/L5/2549:2550,
1/L5/2768:2770		No text annotation
homologous
IL_8CRE_070
NA
IL_9QIW_0771/L5/2589:2593,
1/L5/2752:2756		Triple sheared
homologous
IL_8P9A_295
IL_15190.1
IL_9QIW_0781/L5/2613:2614,
1/L5/2724:2726		Single bulged C
homologous
IL_8P9A_297
IL_05642.1
IL_9QIW_0791/L5/2614:2615,
1/L5/2722:2724		Single stack bend
homologous
IL_8P9A_298
IL_15011.1
IL_9QIW_0801/L5/2646:2648,
1/L5/2685:2688		Isolated tHS basepair with bulges
geometric
IL_4V9F_076
IL_87316.1
IL_9QIW_0811/L5/2651:2653,
1/L5/2681:2682		Single bulged G
geometric
IL_6TFF_002
IL_28408.1
IL_9QIW_0821/L5/2656:2662,
1/L5/2672:2678		No text annotation
homologous
IL_8P9A_301
IL_93476.1
IL_9QIW_0831/L5/2704:2705,
1/L5/2710:2712		No text annotation
IL_9QIW_0841/L5/2832:2838,
1/L5/3850:3853		No text annotation
homologous
IL_8CRE_079
NA
IL_9QIW_0851/L5/2844:2846,
1/L5/3842:3844		No text annotation
homologous
IL_8P9A_303
IL_10432.1
IL_9QIW_0861/L5/2847:2850,
1/L5/3840:3841		Major groove platform; stack outside cWW
geometric
IL_8P9A_304
IL_74641.1
IL_9QIW_0871/L5/2847:2855,
1/L5/3837:3841		No text annotation
geometric
IL_8CRE_082
NA
IL_9QIW_0881/L5/2850:2855,
1/L5/3837:3840		No text annotation
homologous
IL_8CRE_083
NA
IL_9QIW_0891/L5/3660:3665,
1/L5/3677:3684		No text annotation
homologous
IL_8CRE_088
NA
IL_9QIW_0951/L5/3895:3898,
1/L5/4563:4565		No text annotation
homologous
IL_8CRE_096
NA
IL_9QIW_0961/L5/3900:3901,
1/L5/4558:4561		Major groove platform
geometric
IL_1I6U_001
IL_48076.7
IL_9QIW_0971/L5/3914:3916,
1/L5/4386:4388		No text annotation
geometric
IL_7QR8_004
NA
IL_9QIW_1011/L5/4091:4129,
1/L5/4155:4158		No text annotation
IL_9QIW_1041/L5/4243:4245,
1/L5/4263:4267		No text annotation
homologous
IL_8P9A_326
IL_14250.1
IL_9QIW_1051/L5/4297:4299,
1/L5/4313:4314		Single bulged A
geometric
IL_7DLZ_001
NA
IL_9QIW_1061/L5/4299:4301,
1/L5/4311:4313		Isolated non-canonical cWW pair
geometric
IL_3U4M_001
IL_71625.1
IL_9QIW_1071/L5/4347:4350,
1/L5/4364:4365		No text annotation
IL_9QIW_1081/L5/4412:4416,
1/L5/4426:4430		Double sheared with non-canonical cWW
homologous
IL_8CRE_114
NA
IL_9QIW_1091/L5/4466:4468,
1/L5/4489:4491		Isolated non-canonical cWW pair
geometric
IL_8P9A_337
IL_01003.1
IL_9QIW_1101/L5/4466:4470,
1/L5/4485:4491		No text annotation
IL_9QIW_1111/L5/4468:4470,
1/L5/4485:4489		No text annotation
geometric
IL_3DD2_004
NA
IL_9QIW_1121/L5/4495:4497,
1/L5/4503:4505		Isolated non-canonical cWW pair
homologous
IL_8P9A_340
IL_01003.1
IL_9QIW_1131/L5/4537:4538,
1/L5/4547:4549		Minor groove platform
geometric
IL_8P9A_322
IL_34520.1
IL_9QIW_1141/L5/4580:4582,
1/L5/4721:4723		Isolated cWH basepair
geometric
IL_4E5C_001
NA
IL_9QIW_1151/L5/4582:4585,
1/L5/4717:4721		Double sheared
homologous
IL_8P9A_342
IL_58355.1
IL_9QIW_1161/L5/4590:4592,
1/L5/4618:4620		Isolated non-canonical cWW pair
homologous
IL_8P9A_343
IL_71625.1
IL_9QIW_1171/L5/4596:4603,
1/L5/4608:4614		8x7 Sarcin-Ricin; G-bulge
homologous
IL_8CRE_125
NA
IL_9QIW_1181/L5/4624:4629,
1/L5/4669:4673		No text annotation
IL_9QIW_1191/L5/4632:4637,
1/L5/4662:4666		No text annotation
homologous
IL_8P9A_346
IL_98200.1
IL_9QIW_1201/L5/4638:4640,
1/L5/4659:4661		Isolated cWH basepair
geometric
IL_4KQ0_003
NA
IL_9QIW_1211/L5/4641:4642,
1/L5/4655:4658		No text annotation
homologous
IL_8P9A_347
NA
IL_9QIW_1221/L5/4681:4685,
1/L5/4705:4709		UAA/GAN
homologous
IL_8P9A_348
IL_08938.1
IL_9QIW_1241/L5/4743:4746,
1/L5/4954:4957		Tandem non-canonical cWW pairs
geometric
IL_8CRE_440
IL_15225.1
IL_9QIW_1251/L5/4749:4751,
1/L5/4948:4951		No text annotation
IL_9QIW_1261/L5/4756:4765,
1/L5/4869:4877		No text annotation
IL_9QIW_1271/L5/4769:4771,
1/L5/4863:4865		Isolated non-canonical cWW pair
geometric
IL_5J7L_326
NA
IL_9QIW_1291/L5/4885:4889,
1/L5/4930:4934		Triple non-canonical cWW pairs
geometric
IL_8S95_002
NA
IL_9QIW_1301/L5/4891:4896,
1/L5/4924:4928		No text annotation
IL_9QIW_1321/L5/4992:4994,
1/L5/5057:5059		Isolated non-canonical cWW pair
geometric
IL_4RBZ_002
NA
IL_9QIW_1331/L5/4996:4997,
1/L5/5053:5055		Single bulged C
geometric
IL_1KUQ_002
IL_05642.1
IL_9QIW_1341/L5/5000:5002,
1/L5/5045:5050		No text annotation
homologous
IL_8CRE_138
NA
IL_9QIW_1351/L5/5003:5009,
1/L5/5039:5044		No text annotation
IL_9QIW_1361/L5/5012:5014,
1/L5/5035:5036		Single bulged U
homologous
IL_8P9A_361
IL_97561.1
IL_9QIW_1381/L7/15:16,
1/L7/62:64		Single bulged A
homologous
IL_8OI5_134
IL_14190.1
IL_9QIW_1391/L7/21:27,
1/L7/52:57		No text annotation
homologous
IL_8OI5_135
IL_41504.1
IL_9QIW_1401/L7/28:29,
1/L7/48:51		Major groove minor groove platform; mini C-loop
homologous
IL_5J7L_357
NA
IL_9QIW_1411/L7/32:36,
1/L7/41:45		No text annotation
homologous
IL_9DFE_113
IL_58103.12
IL_9QIW_1451/L8/64:66,
1/L8/92:95		Isolated non-canonical cWW with bulges
homologous
IL_8P9A_371
IL_68118.1

Problematic loops

#loop idProblemSequence
IL_9QIW_011No text annotation
IL_9QIW_021Isolated non-canonical cWW pair
IL_9QIW_023Multiple bulged bases
IL_9QIW_025No text annotation
IL_9QIW_026Isolated non-canonical cWW pair
IL_9QIW_028No text annotation
IL_9QIW_034Single stack bend
IL_9QIW_037No text annotation
IL_9QIW_044Single stack bend
IL_9QIW_048No text annotation
IL_9QIW_049Triple sheared
IL_9QIW_050No text annotation
IL_9QIW_054No text annotation
IL_9QIW_055No text annotation
IL_9QIW_075No text annotation
IL_9QIW_090Minor groove platform, major groove intercalation
IL_9QIW_091No text annotation
IL_9QIW_092Single stack bend
IL_9QIW_093No text annotation
IL_9QIW_094No text annotation
IL_9QIW_098No text annotation
IL_9QIW_099No text annotation
IL_9QIW_100No text annotation
IL_9QIW_102Isolated non-canonical cWW pair
IL_9QIW_103Isolated non-canonical cWW pair
IL_9QIW_123Isolated non-canonical cWW pair
IL_9QIW_128Single stack bend
IL_9QIW_131Single bulged C
IL_9QIW_137Double sheared
IL_9QIW_1428x7 Sarcin-Ricin; G-bulge
IL_9QIW_143Isolated non-canonical cWW pair
IL_9QIW_144Isolated non-canonical cWW pair

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_9QIW_0011/L5/112:116,
1/L5/155:160,
1/L5/275:278		No text annotation
J3_9QIW_0021/L5/196:199,
1/L5/215:228,
1/L5/240:244		No text annotation
J3_9QIW_0031/L5/351:367,
1/L5/374:379,
1/L8/21:24		No text annotation
homologous
J3_8P9A_045
J3_07616.1
J3_9QIW_0041/L5/380:387,
1/L5/414:415,
1/L8/19:20		No text annotation
geometric
J3_8P9A_046
J3_68715.1
J3_9QIW_0051/L5/380:390,
1/L5/401:415,
1/L8/19:20		No text annotation
homologous
J3_8P9A_047
J3_17917.1
J3_9QIW_0061/L5/451:455,
1/L5/701:705,
1/L5/1292:1296		No text annotation
J3_9QIW_0081/L5/1726:1727,
1/L5/1802:1806,
1/L5/1832:1837		No text annotation
homologous
J3_8P9A_051
J3_84137.1
J3_9QIW_0091/L5/1969:1971,
1/L5/1995:2001,
1/L5/2016:2018		No text annotation
homologous
J3_8P9A_052
J3_37832.1
J3_9QIW_0101/L5/2393:2399,
1/L5/2805:2807,
1/L5/2819:2822		No text annotation
homologous
J3_8CRE_013
NA
J3_9QIW_0111/L5/2403:2405,
1/L5/2785:2791,
1/L5/2800:2801		No text annotation
J3_9QIW_0121/L5/2440:2445,
1/L5/2515:2519,
1/L5/2536:2537		No text annotation
homologous
J3_8P9A_055
J3_94309.1
J3_9QIW_0131/L5/2575:2576,
1/L5/2585:2589,
1/L5/2756:2757		No text annotation
homologous
J3_8P9A_087
J3_05348.1
J3_9QIW_0141/L5/2598:2602,
1/L5/2737:2738,
1/L5/2742:2747		No text annotation
homologous
J3_8CRE_018
NA
J3_9QIW_0151/L5/3937:3939,
1/L5/4074:4078,
1/L5/4168:4173		No text annotation
J3_9QIW_0161/L5/4241:4243,
1/L5/4267:4269,
1/L5/4278:4283		No text annotation
homologous
J3_8P9A_062
J3_05327.1
J3_9QIW_0171/L5/4463:4466,
1/L5/4491:4493,
1/L5/4507:4513		No text annotation
homologous
J3_8CRE_023
NA
J3_9QIW_0181/L5/4751:4754,
1/L5/4879:4883,
1/L5/4936:4948		No text annotation
J3_9QIW_0191/L7/9:14,
1/L7/65:66,
1/L7/109:110		No text annotation
homologous
J3_8P9A_066
J3_26985.1
J3_9QIW_0201/L8/44:45,
1/L8/58:64,
1/L8/95:99		No text annotation
homologous
J3_8CRE_027
NA
J4_9QIW_0011/L5/111:112,
1/L5/278:283,
1/L5/304:310,
1/L5/327:330		No text annotation
homologous
J4_8P9A_012
J4_94698.1
J4_9QIW_0021/L5/196:199,
1/L5/215:222,
1/L5/226:228,
1/L5/240:244		No text annotation
J4_9QIW_0031/L5/2406:2410,
1/L5/2434:2439,
1/L5/2538:2539,
1/L5/2777:2784		No text annotation
homologous
J4_8P9A_015
J4_47264.1
J4_9QIW_0041/L5/2618:2619,
1/L5/2637:2642,
1/L5/2692:2698,
1/L5/2718:2719		No text annotation
J4_9QIW_0051/L5/4587:4590,
1/L5/4620:4621,
1/L5/4676:4678,
1/L5/4712:4715		No text annotation
J5_9QIW_0011/L5/19:21,
1/L8/35:42,
1/L8/101:106,
1/L8/113:114,
1/L8/136:138		No text annotation
homologous
J5_8CRE_001
NA
J5_9QIW_0021/L5/1335:1340,
1/L5/1516:1519,
1/L5/1658:1661,
1/L5/2288:2290,
1/L5/2345:2351		No text annotation
homologous
J5_8CRE_002
NA
J5_9QIW_0031/L5/4199:4200,
1/L5/4232:4235,
1/L5/4289:4295,
1/L5/4316:4318,
1/L5/4329:4331		No text annotation
J6_9QIW_0011/L5/21:26,
1/L5/57:67,
1/L5/74:78,
1/L5/105:109,
1/L5/332:339,
1/L8/33:35		No text annotation
J6_9QIW_0021/L5/1352:1355,
1/L5/1384:1388,
1/L5/1395:1399,
1/L5/1418:1421,
1/L5/1464:1466,
1/L5/1499:1504		No text annotation

Problematic loops

#loop idProblemSequence
J3_9QIW_007No text annotation

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