HL_9QJC_001

3D structure

PDB id

9QJC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast pre-60S Domain II intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGAAAA

Length

6 nucleotides

Bulged bases

9QJC|1|1|A|384, 9QJC|1|1|A|385, 9QJC|1|1|A|386

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QJC|1|1|U|382
9QJC|1|1|G|383
9QJC|1|1|A|384
9QJC|1|1|A|385
9QJC|1|1|A|386
9QJC|1|1|A|387

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain 5

Ribosome biogenesis protein MAK21

Chain 6

Nucleolar complex protein 2