HL_9QJC_002

3D structure

PDB id

9QJC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast pre-60S Domain II intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GCCUCGGU

Length

8 nucleotides

Bulged bases

9QJC|1|1|U|545, 9QJC|1|1|C|546

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QJC|1|1|G|542
9QJC|1|1|C|543
9QJC|1|1|C|544
9QJC|1|1|U|545
9QJC|1|1|C|546
9QJC|1|1|G|547
9QJC|1|1|G|548
9QJC|1|1|U|549

Current chains

Chain 1

25S ribosomal RNA

Nearby chains