HL_9QQA_008
3D structure
- PDB id
- 9QQA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of translating ribosome, NAC and NMT1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- UCAGGG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9QQA_008 not in the Motif Atlas
- Geometric match to HL_8CRE_199
- Geometric discrepancy: 0.1571
- The information below is about HL_8CRE_199
- Detailed Annotation
- GNRA variation
- Broad Annotation
- GNRA variation
- Motif group
- HL_34789.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 397
Unit IDs
9QQA|1|A2|U|417
9QQA|1|A2|C|418
9QQA|1|A2|A|419
9QQA|1|A2|G|420
9QQA|1|A2|G|421
9QQA|1|A2|G|422
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain Ab
- 40S ribosomal protein S2
- Chain Ai
- Small ribosomal subunit protein uS4
- Chain Ak
- Small ribosomal subunit protein uS17
- Chain Av
- Small ribosomal subunit protein uS8
- Chain Aw
- 40S ribosomal protein S23
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