HL_9QQA_009
3D structure
- PDB id
- 9QQA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of translating ribosome, NAC and NMT1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CCUGAGAAACGG
- Length
- 12 nucleotides
- Bulged bases
- 9QQA|1|A2|C|451, 9QQA|1|A2|G|452
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9QQA_009 not in the Motif Atlas
- Geometric match to HL_8CRE_200
- Geometric discrepancy: 0.1087
- The information below is about HL_8CRE_200
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_86432.1
- Basepair signature
- cWW-tWH-tWH-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
9QQA|1|A2|C|442
9QQA|1|A2|C|443
9QQA|1|A2|U|444
9QQA|1|A2|G|445
9QQA|1|A2|A|446
9QQA|1|A2|G|447
9QQA|1|A2|A|448
9QQA|1|A2|A|449
9QQA|1|A2|A|450
9QQA|1|A2|C|451
9QQA|1|A2|G|452
9QQA|1|A2|G|453
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain Ad
- 40S ribosomal protein S4
- Chain Af
- 40S ribosomal protein S6
- Chain Ah
- 40S ribosomal protein S8
- Chain Ax
- 40S ribosomal protein S24
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