HL_9QQA_014

3D structure

PDB id

9QQA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of translating ribosome, NAC and NMT1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CAGCCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9QQA_014 not in the Motif Atlas

Geometric match to HL_8CRE_205

Geometric discrepancy: 0.0879

The information below is about HL_8CRE_205

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_93535.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

6

Unit IDs

9QQA|1|A2|C|619
9QQA|1|A2|A|620
9QQA|1|A2|G|621
9QQA|1|A2|C|622
9QQA|1|A2|C|623
9QQA|1|A2|G|624

Current chains

Chain A2

18S rRNA

Nearby chains

Chain Aw

40S ribosomal protein S23